Prosite motif:
AAA-protein family signature ABC transporters family signature Acetate and butyrate kinases family signatures Adenosine and AMP deaminase signature Adenylate kinase signature Aldehyde dehydrogenases active sites Aminoacyl-transfer RNA synthetases class-I signature Aminoacyl-transfer RNA synthetases class-II signatures Aminopeptidase P and proline dipeptidase signature Ammonium transporters signature AP endonucleases family 2 signatures Asparaginase / glutaminase active sites signatures ATP synthase a subunit signature ATP synthase alpha and beta subunits signature ATP synthase c subunit signature ATP-dependent serine proteases, lon family, serine active site ATP/GTP-binding site motif A (P-loop) Bacterial ribonuclease P protein component signature Binding-protein-dependent transport systems inner membrane component C-5 cytosine-specific DNA methylases signatures CDP-alcohol phosphatidyltransferases signature Chaperonins clpA/B signatures Crystallins beta and gamma 'Greek key' motif signature Cytidine and deoxycytidylate deaminases zinc-binding region signature Cytochrome c family heme-binding site signature Cytosol aminopeptidase signature Cytosolic fatty-acid binding proteins signature DNA topoisomerase II signature dnaJ domains signatures and profile E1-E2 ATPases phosphorylation site Elongation factor Ts signatures Enolase signature Eukaryotic and viral aspartyl proteases active site Formamidopyrimidine-DNA glycosylase signature Fructose-bisphosphate aldolase class-II signatures Glucose inhibited division protein A family signatures Glycosyl hydrolases family 5 signature GTP-binding elongation factors signature GTP1/OBG family signature Guanylate kinase signature and profile Heat shock hsp70 proteins family signatures HIT family signature Hypothetical cof family signatures Initiation factor 3 signature Inorganic pyrophosphatase signature Legume lectins signatures Lipolytic enzymes "G-D-S-L" family, serine active site Methionine aminopeptidase signatures N-6 Adenine-specific DNA methylases signature Neutral zinc metallopeptidases, zinc-binding region signature Phosphatidate cytidylyltransferase signature Phosphoglucomutase and phosphomannomutase phosphoserine signature Phosphopantetheine attachment site Phosphoribosyl pyrophosphate synthetase signature Prenyl group binding site (CAAX box) Prokaryotic membrane lipoprotein lipid attachment site Prokaryotic-type class I peptide chain release factors signature Prolipoprotein diacylglyceryl transferase signature Protein kinases signatures and profile Protein secA signatures Protein secY signatures PTS HPr component phosphorylation sites signatures Purine and other phosphorylases family 1 signature Purine/pyrimidine phosphoribosyl transferases signature recA signature recR protein signature Regulator of chromosome condensation (RCC1) signatures Ribonuclease II family signature Ribonuclease III family signature Ribosomal protein L1 signature Ribosomal protein L11 signature Ribosomal protein L14 signature Ribosomal protein L16 signatures Ribosomal protein L17 signature Ribosomal protein L2 signature Ribosomal protein L20 signature Ribosomal protein L21 signature Ribosomal protein L22 signature Ribosomal protein L24 signature Ribosomal protein L27 signature Ribosomal protein L29 signature Ribosomal protein L3 signature Ribosomal protein L34 signature Ribosomal protein L36 signature Ribosomal protein L5 signature Ribosomal protein L6 signatures Ribosomal protein L9 signature Ribosomal protein S11 signature Ribosomal protein S12 signature Ribosomal protein S13 signature Ribosomal protein S14 signature Ribosomal protein S15 signature Ribosomal protein S17 signature Ribosomal protein S19 signature Ribosomal protein S2 signatures Ribosomal protein S3 signature Ribosomal protein S4 signature Ribosomal protein S5 signature Ribosomal protein S7 signature Ribosomal protein S8 signature Ribosomal protein S9 signature Ribosomal RNA adenine dimethylases signature Ribulose-phosphate 3-epimerase family signatures Rlu family of pseudouridine synthase signature RNA polymerases beta chain signature Rubredoxin signature S-adenosylmethionine synthetase signatures Serine proteases, subtilase family, active sites Sigma-54 interaction domain signatures and profile Sigma-70 factors family signatures SRP54-type proteins GTP-binding domain signature Sugar transport proteins signatures Thioredoxin family active site Thymidine and pyrimidine-nucleoside phosphorylases signature Thymidine kinase cellular-type signature TonB-dependent receptor proteins signatures Transketolase signatures Tubulin-beta mRNA autoregulation signal Uncharacterized protein family UPF0006 signatures Uncharacterized protein family UPF0011 signature Uncharacterized protein family UPF0054 signature Uracil-DNA glycosylase signature Urease signatures
Role:
Amino acid Biosynthesis Biosynthesis of cofactors, prosthetic groups, and carriers Cell envelope Cellular processes Central intermediary metabolism Energy metabolism Fatty acid and phospholipid metabolism Hypothetical Other categories Purines, pyrimidines, nucleosides, and nucleotides Regulatory functions Replication RNA Transcription Translation Transport and binding proteins Unassigned
Subrole:
Amino acid Biosynthesis:Aspartate family Biosynthesis of cofactors, prosthetic groups, and carriers:FAD biosynthesis Biosynthesis of cofactors, prosthetic groups, and carriers:Folic acid Biosynthesis of cofactors, prosthetic groups, and carriers:Heme and porphyrin Biosynthesis of cofactors, prosthetic groups, and carriers:Pyridine nucleotides Biosynthesis of cofactors, prosthetic groups, and carriers:thiamin Biosynthesis of cofactors, prosthetic groups, and carriers:Thioredoxin, glutaredoxin, and glutathione Cell envelope:Membranes, lipoproteins, and porins Cell envelope:Surface polysaccharides, lipopolysaccharides and antigens Cellular processes:Cell division Cellular processes:Cell killing Cellular processes:Chaperones Cellular processes:Detoxification Cellular processes:Protein and peptide secretion Central intermediary metabolism:Degradation of polysaccharides Central intermediary metabolism:Other Central intermediary metabolism:Phosphorous compounds Energy metabolism:ATP-proton motive force interconversion Energy metabolism:Glycolysis Energy metabolism:Pentose Phosphate pathway Energy metabolism:Sugars Fatty acid and phospholipid metabolism:Degradation Fatty acid and phospholipid metabolism:General Hypothetical:Hypothetical Other categories:Other Purines, pyrimidines, nucleosides, and nucleotides:Nucleotide and nucleoside interconversions Purines, pyrimidines, nucleosides, and nucleotides:Purine ribonucleotide biosynthesis Purines, pyrimidines, nucleosides, and nucleotides:Pyrimidine ribonucleotide biosynthesis Purines, pyrimidines, nucleosides, and nucleotides:Salvage of nucleosides and nucleotides Regulatory functions:General Replication:DNA replication, restriction, modification, recombination, and repair RNA:ribosomal RNA RNA:RNA degradation RNA:stable RNAs RNA:tRNA Transcription:Degradation of RNA Transcription:RNA synthesis, modification and DNA transcription Transcription:Transcription factors Translation:Amino acyl tRNA synthetases and tRNA modification Translation:Degradation of proteins, peptides, and glycopeptides Translation:General Translation:Protein modification Translation:Protein modification and translation factors Translation:Ribosomal proteins: synthesis and modification Translation:translation; tRNA modification Transport and binding proteins:ABC transport Transport and binding proteins:Amino acids, peptides and amines Transport and binding proteins:Anions Transport and binding proteins:Carbohydrates, organic alcohols, and acids Transport and binding proteins:Cations Transport and binding proteins:General Transport and binding proteins:Other Unassigned:General